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Alberts, B.; Bray, D.; Hopkin, K.; Johnson, A.; et al.(2014).Essential cell biology(4th Edition), NY: Garland Science.
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Alberts, B.; Johnson, A.; Lewis, J.; Morgan, D.; et al.(2014).Molecular biology of the cell(6th Edition), NY: Garland Science.
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I 细胞内蛋白质浓度,参见:http://book.bionumbers.org/how-many-proteins-are-in-a-cell/; Ho, B.; Baryshnikova, A.; Brown, G. W.(2018). Unification of protein abundance datasets yields a quantitative saccharomyces cerevisiae proteome.Cell systems, https://doi.org/10.1016/j.cels.2017.12.004; Kim, M.; Pinto, S.; Getnet, D.; et al.(2014). A draft map of the human proteome.Nature, 509: 575–581; Wilhelm, M.; Schlegl, J.; Hahne, H.; et al.(2014). Mass-spectrometry-based draft of the human proteome.Nature, 509: 582–587。
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II 螃蟹计算机参见:Gunji,Y.-P.; Nishiyama, Y.; Adamatzky, A.(2012). Robust Soldier Crab Ball Gate. arXiv
:1204.1749[cs. ET]。
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III 酶与底物的结合参见:Koshland, D. E.(1958). Application of a Theory of Enzyme Specificity to Protein Synthesis.Proceedings of the National Academy of Sciences, 44(2): 98–104。
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IV 核定位序列参考文献:Kirby, T. W.; Gassman, N. R.; Smith, C.E.; et al.(2017). DNA polymerase β contains a functional nuclear localization signal at its N-terminus.Nucleic acids research, 45(4)
:1958-1970。
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V 核数出序列参见:la Cour, T.; Kiemer, L.; Mølgaard, A.; et al.(2004). Analysis and prediction of leucine-rich nuclear export signals.Protein engineering design and selection, 17(6): 527–36。
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VI 内质网向高尔基体的囊泡转移参见:D’Arcangelo, J. G.; Stahmer, K. R.; Miller, E. A.(2013). Vesicle-mediated export from the ER: COPII coat function and regulation.Biochimica et biophysica acta, 1833(11): 2464-2472。
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VII 驱动蛋白参见:Woehlke, G.; Schliwa, M.(2000). Walking on two heads: the many talents of kinesin.Nature reviews molecular cell biology, 1(1): 50–58.。
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VIII 台球构型参考文献:Fredkin, E.; Tofoli, T.(1982). Conservative logic,International journal of theoretical physics, 21(3–4): 219–253。
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IX 布朗运动构型参考文献:Likharev, K. K.(1982). Classical and quantum limitations on energy consumption in computa tion.International journal of theoretical physics, 21(3): 311–326。
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X 查尔斯·班尼特对可逆计算的研究参见:Bennett, C. H.(1982). The thermodynamics of computation — a review.International journal of theoretical physics, 21(12): 905–940。
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XI RNA聚合酶催化可逆反应参见:Sydow, J. F.; Cramer, P.(2009). RNA polymerase fidelity and transcriptional proofread ing(PDF).Current opinion in structural biology, 19(6): 732–9。
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XII RNA聚合酶校正机制参见:Mishanina, T. V.; Palo, M. Z.; Nayak, D.; et al.(2017). Trigger loop of RNA polymerase is a positional, not acid–base, catalyst for both transcription and proofreading.Proceedings of the National Academy of Sciences, 114 (26) E5103-E5112。
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XIII RNA聚合酶速度和精度参见:Maiuri, P.; Knezevich, A.; De Marco, A.; et al.(2011). Fast transcription rates of RNA polymerase II in human cells.Embo reports, 12(12)
:1280-1285; What is faster, transcription or translation?.Cell biology bythe numbers. http://book.bionumbers.org/what-is-faster-transcription-or-translation/; What is the error rate in transcription and translation?.Cell biology by the numbers. http://book.bionumbers.org/what-is-the-error-rate-in-transcription-and-translation/。
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XIV DNA聚合酶速度和精度参见:Pray, L.(2008). Major molecular events of DNA replication.Nature Education, 1(1): 99; Pray, L.(2008). DNA replication and causes of mutation.Nature Education, 1(1): 214; What is the mutation rate during genome replication?Cell biology by the numbers. http://book.bionumbers.org/what-is-the-mutation-rate-during-genome-replication/。
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XV 利奥·西拉德对麦克斯韦妖的反驳参见:Szilard, L.(1929). Über die Entropieverminderung in einem thermodyna mischen System bei Eingrifen intelligenter Wesen (On the reduction of entropy in a thermodynamic system by the intervention of intelligent beings).Zeitschrift für Physik, 53(11–12): 840–856。
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XVI 布里渊计算麦克斯韦妖的工作效率参见:Bennett, C. H.(1987). Demons, Engines, and the Second Law(PDF).Scientific American, 257(5): 108–116; Sagawa, T.(2012). Thermodynamics of information processing in small systems. Springer science and business media, 9–14. ISBN 978-4431541677.
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XVII 兰道尔关于不可逆计算的论文参见:Landauer, R. (1961). Irreversibility and Heat Generation in the Computing Pro cess.IBM journal of research and development, 5(3): 183–191。
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XVIII 用实验验证兰道尔原理,参见:Toyabe, S.; Sagawa, T.; Ueda, M.; et al.(2010). Experimental demonstration of infor mation-to-energy conversion and validation of the generalized Jarzynski equality.Nature physics, 6: 988–992。
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生命的起源:所有生命的共同祖先在40亿年前是怎样诞生的? 图片版权说明
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感谢为本书提供图片的个人和组织,以及绘制大部分插图的本书作者,是你们让这本书更加精彩。此外,需要特别指出的是,很遗憾没能得到图序—31的拍摄者David Liittschwager以及图增—9的拍摄者Juan Junoy的邮件回复,也未能及时找到图序—19和图2—55的原作者,期待拍摄者和图片所有者能在看到邮件或本书的第一时间联系我们。
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